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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109459525, gi...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTATAGRGS IAQTRPQIAG PRRQLGQAAH LLQRSRAARA RTRGSRTSTG SAPAWDAAAL  60
   61 VAGPLKQLHA RPATMAERPA RRAPPARALL LALAGALLAP RAARGVSLWD QRGAYEVAKA 120
  121 SLLTKDPGSP GQSIPAKDHP DVLTVQLQLE SRELILSLER NEGLIANGFT ETHYLQDGSD 180
  181 VSFTRNYTDH CYYHGHVQGD AASVVSLSTC SGLRGLIVFE NKTYILEPMK NTTDRYKLVP 240
  241 AENMKNIQGL CGSHHNKSSL TMEDVFPEPS QMWGRRHKRE TLKMTKYVEL VIVADNREFQ 300
  301 RQGKDLEKVK QRLIEIANHV DKFYRPLNIR IVLVGVEVWN DIDKCSISQD PFTSLHEFLD 360
  361 WRKLKLLPRK SHDNAQLISG VYFQGTTIGM APIMSMCTAE QSGGVVMDHS DSPLGAAVTL 420
  421 AHELGHNFGM NHDTLERGCS CRMAAEKGGC IMNPSTGFPF PMVFSSCSRK DLEASLEKGM 480
  481 GMCLFNLPEV KQAFGGRKCG NGYVEDGEEC DCGEPEECTN RCCNATTCTL KPDAVCAHGQ 540
  541 CCEDCQLKPP GTACRGSSNS CDLPEFCTGT APHCPANVYL HDGHPCQGVD GYCYNGICQT 600
  601 HEQQCVTLWG PGAKPAPGIC FERVNSAGDP YGNCGKDSKS SFVKCELRDA KCGKIQCQGG 660
  661 ASRPVIGTNA VSIETNIPQQ EGGRILCRGT HVYLGDDMPD PGLVLAGTKC AEGKICLNRQ 720
  721 CQNISVFGVH KCAMQCHGRG VCNNRKNCHC EAHWAPPFCD KFGFGGSTDS GPIRQADNQG 780
  781 LTVGILVSVL CLLAAGFVVY LKRKTLMRLL FTHKKNTMEK LRCVHTSRTP SGPRPGQAHH 840
  841 ILGKGPLMSR PPHFNTTKDR HSLKCQNIDI SRPLNARVVP QPQSPQRVLL PLHQAPRAPS 900
  901 GPARPLPANP AVRQAQGTHK PSPPQKPLPA DPLSRTSRLT GALVRTPGQQ ESGHRPAPIR 960
  961 PAPKHQVPRL SHNAYIK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle