YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109477511, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRAGAPFTT LRSRRLAAGA ESSELRVSGG AERVGGDPAG RVAMSHGHSH GGGGCRCAAE  60
   61 REEPPEQRGL AYGLYLRIDL ERLQCLNESR EGSGRGVFKP WEERTDRSKF VESDADEELL 120
  121 FNIPFTGNVK LKGIIIMGED DDSHPSEMRL YKNIPQMSFD DTEREPDQTF SLNRDITGEL 180
  181 EYATKISRFS NVYHLSIHIS KNFGADTTKI FYIGLRGEWT ELRRHEVTIC NYEASANPAD 240
  241 HRVHQEPGLW NRLTTGSGAG AKGQPL

Type	Start	End	Confidence
Signal Peptide	1	17	0.56
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	266	0.99