YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109475659, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRAGRWAPL LLFLMQSALG RPRLAPPRNV TLLSQNFTVY LTWLPGLGSP PNVTYFVTYK  60
   61 SYNNHWRRVE HCAGISTLVC PMMCLKKQDL YIKFKGRVQA ASAHVKSPWV ESRYLEYIFD 120
  121 VELAPPTLVL SQKEKILNVN ATYQLPPCMP RSLELKYQVE FWKEDLRSKT LFPDTPYGQP 180
  181 VKIPLQQDAR GRHCFSARTV YTLTHTKYSL FSEPSCIFLA APGANRAVLA VPLLLLLLIA 240
  241 AAAAGTAWKK MDGNPWFQWV KMPQALDFSE NRHPVATFQP SGPEFSGDLI LCPQKELTIR 300
  301 TRPVPRVRGP ATLQAGSEKD STEDEDEDTD DDGDSIQPYL ERPLFVREKL QVTEHSEADE 360
  361 SGVDSVGSEG SSAWDSSGGS WSSTGVSSGD SSYKDEAGSS SCLDQKKPDQ EPHGDGHQGP 420
  421 LPCLEFSEDL GTVEELLKDD LSGWRIWGTL SPKRDLAPVE PPVSLQTLTF CWDSNPEEEE 480
  481 EEEEEEEEEE EEEEEDWESD LKDSNTSCWD ASSPQRTDVR GGMLGDYMVR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle