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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109477241, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGQYNNKDG VLKSGSSLLP RRVDDRVSVH SGDGVQSDSR RNAGVKIRCS PAGSSGFEHS  60
   61 CSGAFQRVLR ETLGSCLPDF TNGKVGSAKA KRASTRGALQ PLAARRRCGH RRRKWRLVRA 120
  121 RMAAAAAAAA AAMTAAGGGG AGAARSLSRF RGCLAGALLG DCVGAVFEAH DTVSLTSVLS 180
  181 HVQSLEPDPG TPGSARTETL YYTDDTAMTR AMVQSLLAKE AFDEVDMAHR FAQEYKKDPD 240
  241 RGYGAGVITV FKKLLNPKCR DVYEPARAQF NGKGSYGNGG AMRVAGIPLA YHSVQDVQKF 300
  301 ARLSAQLTHA SSLGYNGAIL QALAVHLALQ GVSSSEHFLE QLLGHMEELE GDAQSVLDAK 360
  361 ELGMEERPYS SRLKKVGELL DQDAVSREEV VSELGNGIAA FESVPTAIYC FLRCMEPDPE 420
  421 IPSTFNSLQR TLIYSISLGG DTDTIATMAG AIAGAYYGVE QVPESWQQSC EGYEETDVLA 480
  481 QSLHRVFQES P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle