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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109475482, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGALMPLPS LLLLLLGCGP RVSSGGGAGG AAGYAPVKYV QPMQKGPVGP PFREGKGQYL  60
   61 EMPLPILPMD LKGEPGPPGK PGPRGPPGPP GFPGKPGTGK PGVHGQPGPA GPPGFSRMGK 120
  121 AGPPGLPGKV GPPGQPGLRG EPGIRGDQGV RGPPGPPGLP GPSGITVPGK PGAQGAPGPP 180
  181 GFRGEPGPQG EPGPRGDRGL KGDNGVGQPG LPGAPGQAGA PGPPGLPGPA GLGKPGLDGL 240
  241 PGAPGDKGDL GPPGVPGSRG EPGAVGPKGP PGVDGVGIPG AAGVPGPQGP AGAKGEPGLR 300
  301 GPPGLIGPVG YGMPGKPGPK GDRGPVGAPG LLGDRGEPGE DGEPGEQGPQ GLGGPPGLPG 360
  361 SAGLPGRRGP PGSKGEVGPG GPPGVPGIRG DQGPNGLAGK PGLPGERGLP GTQGPPGPTG 420
  421 PKGEPGFTGR PGGPGVAGAL GQKGDLGLPG QPGLRGPSGI PGLQGPAGPI GPQGLPGLKG 480
  481 EPGLPGPPGE GKVGEPGSAG PTGPPGVPGS PGLTGPPGPP GPPGPPGAPG ALDETGIAGL 540
  541 HLPNGGVEGA VLGKGGKPQF GLGELSAHAT PAFTAVLTSP FPASGMPVRF DRTLYNGHSG 600
  601 YNPATGIFTC PVGGVYYFAY HVHVKGTNVW VALYKNNVPA TYTYDEYKKG YLDQASGGAV 660
  661 LQLRPNDQVW VQMPSDQANG LYSTEYIHSS FSGFLLCPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle