YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109475491, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLGLCVVAL VLSWTHLAVG SRGIKGKRQR RISAEGSQSC AKGCELCSEV NGCLKCSPKL  60
   61 FILLERNDIR QVGVCLPSCP PGYFDARNPD MNKCIKCKIE HCEACFSHNF CTKCQEGLYL 120
  121 HKGRCYPACP EGSTAANSTM ECGSPAQCEM SEWSPWGPCS KKRKLCGFRK GSEERTRRVL 180
  181 HAPGGDQTNC SDTKETRKCT VRRTPCPEGQ KRKKASQGRR ENANRHPTRK NSKEPGSNSR 240
  241 RHKGQQQPQP GTAGPLTSVG PT

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	262	0.99