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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CO8B_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTGAQVWRA LAKSCLLCAA LGCLHLPGAR GEKPDFFETN AVNGSLVRSR PVRSVDVTPA  60
   61 PTDCQLSTWS SWTACDPCQK KRYRHTYLLR PSQFYGELCD FSDKEVEDCV TNRACRSQVR 120
  121 CEGFVCAQTG RCVNRRLLCN GDNDCGDQSD EANCRRIYKK CSQDMEQYWA IGNLASGINL 180
  181 FTNTFEGPVL DHRYYAGACS PHYILNTNFR KPYNVESYTP QTQGKYEFAL TEYESYFDFE 240
  241 HNVTEKATSK SSFKFGFKLD GLVEFGVRKE SNEGRHYISR TKRFSHTKSK FLHARSVLEV 300
  301 AHYKLKSRQL MLHYEFLQRV KSLPLEYSYG EYRDLLRDFG THFITEAVLG GIYEYTLIMN 360
  361 KDAMERGDYT LDHVSACAGG GFQIGGNVYK VYLKLGVSEK KCSDILNEIK DRNKRRTMVE 420
  421 DLVVLVRGGT SEYITSLAYK DLPTAELMKE WGDAVQYNPA IIKLKAEPLY ELVTATDFAY 480
  481 SSTVKQNMKK ALEEFQMEVS SCRCAPCRNN GVPILKESRC ECICPAGFQG VACEVTNRKD 540
  541 IPIDGKWSCW SDWSPCSGGR KTRQRQCNNP APQRGGSPCS GPASETLDC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle