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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109476760, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSLAGLVLC GVSLLLYGLV EGAMDLILIN SLPLVSDAET SLTCIASGWH PHEPITIGRD  60
   61 FEALMNQHQD PLEVTQDVTR EWAKKVVWKR EKASKINGAY FCEGRVRGQA IRIRTMKMRQ 120
  121 QASFLPATLT MTVDRGDNVN ISFKKVLIKE EDAVIYKNGC EAQKWGPDCN RPCTTCKNNG 180
  181 VCHEDTGECI CPPGFMGRTC EKACEPHTFG RTCKERCSGS EGCKSYVFCL PDPYGCSCAT 240
  241 GWRGLQCNEA CPYGHYGPDC KLRCHCTNEE MCDRFQGCLC SQGWQGLQCE KEGRPRMTPQ 300
  301 IEDLPDHIEV NSGKFNPICK ASGWPLPTSE EMTLVKPDGT VLQPNDFNHT DHFSVAIFTV 360
  361 NRILPPDSGV WVCSVNTVAG MVEKPFNISV KVLPEPLHAP NVIDTGHNFA IINISSEPYF 420
  421 GDGPIKSKKL FYKPVNQAWK YIQVMNEIVT LNYLEPRTDY ELCVQLVRPG EGGEGHPGPV 480
  481 RRFTTASIGL PPPRGLSLLP KSQTALNLTW QPIFTSSEDE FYVEVERWSQ QTRSDQQNIK 540
  541 VPGNLTSVLL NNLLPREQYS VRARVNTKAQ GEWSEELRAW TLSDILPPQP ENIKITNITD 600
  601 YTALVSWTIV DGYSISSIII RYKVQGKNED QHIDVKIKNA TITQYQLKGL EPETTYHVDI 660
  661 FAENNIGSSN PAFSQEIRTL PAPKDLGGGK MLLIAILGSA GMTCITVLLA FLIMLQLKRA 720
  721 NVQRRMAQAF QNVREEPAVQ FNSGTLALNR KAKNNPDPTI YPVLDWNDIK FQDVIGEGNF 780
  781 GQVLKARIKK DGLRMDAAIK RMKEYASKDD HRDFAGELEV LCKLGHHPNI INLLGACEHR 840
  841 GYLYLAIEYA PHGNLLDFLR KSRVLETDPA FAIANSTAST LSSQQLLHFA ADVARGMDYL 900
  901 SQKQFIHRDL AARNILVGEN YIAKIADFGL SRGQEVYVKK TMGRLPVRWM AIESLNYSVY 960
  961 TTNSDVWSYG VLLWEIVSLG GTPYCGMTCA ELYEKLPQGY RLEKPLNCDD EVYDLMRQCW1020
 1021 REKPYERPSF AQILVSLNRM LEERKTYVNT TLYEKFTYAG IDCSAEEAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle