YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149059575, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPGLQQARS RGAPSPDPAM QVPPGSADSL WRSTRPWRTR SYFYLSTIAL VCLVVALAII  60
   61 LVLVVQKKDS TPKTTESVPL KGGNCSEDLL CTLKRTPSKK SWAYLQVSKH LNSAKLSWNQ 120
  121 DGTIHGLVYQ DGNLVVQFPG WYFIICQLQF LVQCSNHSMD LTLQLVINSK IKKQALVTVC 180
  181 ESGVQGKNIY HNLSQFLLHY LQVNSTISVR VDNFQYVDTN TFPLDNVLSV FLYSSSD

Type	Start	End	Confidence
Cytoplasmic	1	41	0.95
Transmembrane Helix	42	64	0.95
Non-Cytoplasmic	65	237	0.93