YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109476541
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYPFPTAPP VDPFAKIKVE DCGRTKGCFR YGKPGCNAET CDYFLSYRMI GADVEFELSA  60
   61 DTDGWVAVGF SSDKKMGGDD VMACVHDDNG RVRIQHFYNV GQWAKEVQRN PARDEEGVFE 120
  121 NNRVTCRFKR PVNVPRDETI VDLHLSWYYL FAWGPAIQGS ITRHDIDSPP ASERVVSIYK 180
  181 YEDIFMPSAA YQTFSSPFCL LLIVALTFYL LMGTP

Type	Start	End	Confidence
Cytoplasmic	1	189	0.77
Transmembrane Helix	190	212	0.86
Non-Cytoplasmic	213	215	0.58