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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109475980, gi...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVIERVISL AILSPNTNKH WVLRRPIPAR RASLPLSPSE NAQPVHVIAA ERFYAGSWES  60
   61 WICCCCVIPV DRPWDRGRRW QLEMADTRSV YETRFEAAVK VIQSLPKNGS FQPTNEMMLR 120
  121 FYSFYKQATE GPCKLSRLGF WDPIGRYKWD AWSSLGDMTK EEAMIAYVEE MKKIIETMPM 180
  181 TEKVEELLHV IGPFYEIVED KKNSKSSDLT SDLGNVLTSS NAKAVKGKAE SSDSGAESEE 240
  241 EEAQDELKGA EQSGSDDKKM MTKSTDKNLE IIVTNGYKDS FAQDSDIHTD SSRSARRSED 300
  301 KKPTDQSSQQ TGNTVLCVHQ DTNEDPGEDA SGVHHLTSDS DSEVYCDSME QFGQEEYYLG 360
  361 GDPAQHLEGS GFCEDAQLSP GNGSIGKMQM REVKGKGEVK HGGEDGRSSS GAPHREKRGG 420
  421 ESEDFSGVRR GRVGHRMPHL SEGTKGRQVG SGGDGERWGS DRGSRGSLNE QIALVLIRLQ 480
  481 EDMQNVLQRL HKLETLTASQ AKLSWQTSNQ PSSQRPSWWP FEMSPGALAF AIIWPFIAQW 540
  541 LVHLYYQRRR RKLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle