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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109474969
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTRLAFCCW ALALVSGWTN FQPMAPSLNF SFRLFPEASP GALGRLAVPP RSGEEEAVGS  60
   61 KVERLGRTFR SRVRRLRELS DRLELVFLVD ESSSVGQTNF LNELKFVRKL LSDFPVVSTA 120
  121 TRVAIVTFSS KNNVVARVDY ISTSRAHQHK CALLSREIPA ITYRGGGTYT MGAFQQAAQI 180
  181 LRHSRENSTK VIFLITDGYS NGGDPRPIAA SLRDFGVEIF TFGIWQGNIR ELNDMASTPK 240
  241 EEHCYLLHSF EEFEALARRA LHEDLPSGSF IQEDMAHCSY LCEAGRDCCD RMASCKCGTH 300
  301 TGQFECICEK GYYGKGLQYE CTACPPGTYK PEASPGGIST CIPCPDENHT SPPGSTAPED 360
  361 CVCREGYQRS GQTCEVVHCP ALKPPENGFF IQNTCKNHFN AACGVRCRPG FDLVGSSIHL 420
  421 CQPNGLWSGT ESFCRVRTCP HLRQPKHGHI SCSTVEMSYN TVCLVTCNEG YRLEGHAKLT 480
  481 CQGNAQWDGT EPRCVERHCA TFQKPKGVII SPPSCGKQPA KPGMICQLGC RQGYILSGIR 540
  541 EVRCATSGKW SARVQTAVCK DVEAPQISCP NDIKAKTEGQ QDSANVTWQV PTAKDNSGEK 600
  601 VSVHVHPAFS PPYLFPIGEV AITYTATDSS GNQASCTFYI KVIDVEPPVI DWCRSPPPIQ 660
  661 VVEKEHPASW DEPQFSDNSG AELVITSSHT QGDLFPHGET VVWYTATDPS GNNRTCDIHI 720
  721 VIKGSPCEVP FTPVNGDFIC AQDSAGVNCS LTCREGYDFT EGSTEKYYCA FEDGIWRPPY 780
  781 STEWPDCAIK RFANHGFKSF EMLYKTTRCD DMDLFKKFSA AFETTLGKMV PSFCSDADDI 840
  841 DCRLEDLTKK YCIEYNYNYE NGFAIGPGGW GAGNRLDYSY DHFLDVVQET PADVGKTRSS 900
  901 RIKRTVPLSD PQIQLIFNIT ASVPLPEERN DTVELENQQR LIRTLETITN RLKSTLNKGP 960
  961 MYSFQLASET VVADSNSLET EKAFLFCRPG SVLRGRMCVN CPLGTSYSLE HSTCESCLMG1020
 1021 SYQDEEGQLE CKLCPPRTHT EYLHSRSISE CKAQCKQGTY SSSGLETCES CPLGTYQPDF1080
 1081 GSRSCLPCPE TTTTVKRGAV DISACGVPCP VGEFSRSGLT PCYPCPRDYY QPNAGKSFCL1140
 1141 ACPFYGTTTI TGATSITDCS SFSSTFSAAE ESIVPLAAPG PTQNKYEVSS QVFHECFLNP1200
 1201 CHNSGTCQQL GRGYVCLCPP GYTGLKCETD IDECSSLPCL NGGICRDKVG GFTCECSSGY1260
 1261 TGQICEENIN ECSSSPCLNK GTCTDGLASY RCTCVSGYVG VHCETDVNEC QSSPCLNNAV1320
 1321 CKDQVGGFSC KCPPGFLGTR CEKNVDECLS QPCQNGATCK DGANSFRCQC PAGFTGPHCE1380
 1381 LNINECQSNP CRNQATCVDE LNSYSCKCRP GFSGRRCETE QPSGFNLDFE VSGIYGYVLL1440
 1441 DGVLPTLHAI TCAFWMKSSD VINYGTPISY ALEGNKDNTF LLTDYNGWVL YVNGKEKITN1500
 1501 CPSVNDGIWH HIAITWTSTG GAWRVYIDGE LSDSGTGLSV GKAIPGGGAL VLGQEQDKKG1560
 1561 EGFNPAESFV GSISQLNLWD YVLSPQQVKS LASSCPEELS RGNVLAWPDF VSGITGKVKV1620
 1621 DSSSIFCSDC PSLEGSVPHL RPASGDRKPG SKVSLFCDPG FQMVGNPVQY CLNQGQWSQP1680
 1681 LPHCERIRCG LPPTLENGFY SAEDLHAGST VTYQCTSGYY LLGDSRMFCT DNGSWNGISP1740
 1741 SCLDVDECAV GSDCSEHASC LNTNGSYICS CKPPYTGDGK NCAEPVKCKA PENPENGHSL1800
 1801 GKIYSVGAEV TFSCEEGHQL VGVRKITCLE SGEWDHLRPS CEAISCGAPP VPENGGVDGS1860
 1861 AFTYGSKVRY RCDKGYTLAG DEESACLASG SWSHSSPVCE LVKCSQPENI NNGKYILSGL1920
 1921 TYLSIASYSC EDGYSLQGPS LIECTASGSW DRAPPSCQLV SCGEPPMVKD ALTTGSNFTF1980
 1981 GNMVTYTCKE GYTLAGPDTI ICQANGKWNS SNHQCLAVSC DEPPNVDHAS PETAHRLFGD2040
 2041 TAFYYCADGY SLADNSQLIC NAQGNWVPPE GQAVPRCIAH FCEKPPSVSY SILESVSKAK2100
 2101 FAAGSVVSFK CMEGFVLNTS AKIECLRGGQ WSPSPLSVQC IPVRCGEPPS ITNGYPSGTN2160
 2161 YSFGAVVAYS CHKGFYIKGE KKSTCEATGQ WSRPLPTCHP VSCNEPPKVE NGFLEHTTGR2220
 2221 TFESEARFQC NPGYKAVGSP VFVCQANRHW HSDAPLSCTP LNCGKPPPIQ NGFLRGESFE2280
 2281 VGSKVQFVCN EGYELVGDNS WTCQKSGKWS KKPSPKCVPT KCAEPPLLEN QLVLKELTSE2340
 2341 VGVMTISCKE GHALQGPSVL KCLPSGQWNG SFPVCKLVLC QSPPLIPFGV PASSGALHFG2400
 2401 STVKYLCVDG FFLRGNPIIL CQVDGTWSSP LPECVPVECP QPEEILNGII HVQGLAYLST2460
 2461 TLYTCKPGFE LVGNTTTLCG ENGQWLGGKP MCRPIECPEP KEILNGQFSS VSFQYGQTIT2520
 2521 YSCDRGFRLE GPKSLTCLET GNWDMDAPSC NAIHCSDPQP IENGFVEGAD YRYGAMIIYS2580
 2581 CFPGFQVVGH AMQTCEETGW SSSSPTCVPI DCGLPPHIDF GDCTRVSDGQ GYFVQEDDMM2640
 2641 EVPYLTPHPQ HLEATAKASE ITEESLVPHA SQFLYGTTVS YRCEPGYELL GIPVLVCQED2700
 2701 GTWNGTAPSC ISIECDLPVA PENGFLHFTQ TTMGSAAQYS CKPGHVLEGS HLRLCLQNKQ2760
 2761 WSGTVPRCEV ISCSEPNPLG NGSIKGNDYS YLGVLHYECD SGYVLNGTEK RTCQENKQWD2820
 2821 GHEPVCLPVD CGSPPVPTNG QVTGEEYTFQ KEIAYSCGEG FILEGARSRV CLTNGSWSGT2880
 2881 TPSCVPVRCP APPQVANGVT DGLDYGFKKE VTFHCLEGYV LQGTPKLTCQ SNGTWDAEVP2940
 2941 ICKPATCGPP ADLPQGFPNG FSFFHGGHIQ YQCFTGYKLH GNPSRRCLPD GSWSGSTPSC3000
 3001 LPCTCSTPII QQGTVNATDL GCGKTVQIEC FKGFKLLGLP EITCDANGQW SDFPLCEHAD3060
 3061 CGPLPTVPNG IVIKGSPSED NVVTYSCRPG YIIQGSSDLI CTEKGIWSEP YPTCEPVSCG3120
 3121 PPPTVANAVA TGEAHTYESK VKLRCLEGYV VDTDTDTFTC QQDGRWFPER INCSPKTCPV3180
 3181 PSNRTRIRVH GDDFQVNRQV SVSCTEGFTY DGADRSTCQP DGTWEPPLSE ESCIPVVCGQ3240
 3241 PESPEHGFVV GSEYSFGSTV VYQCDPGYEL EGNRERVCQE NRQWSGRVAV CRESRCEAPA3300
 3301 EFPNGKAVLE NTTSGPSLLF SCHRGYTLEG PPEAHCTANG TWSHLAPLCK PNPCPVPFVI3360
 3361 PENALLSERE FYVNQNVSIK CREGFLLKGN GIITCNPDET WTQTNARCEK ISCGPPTHVE3420
 3421 NAIARGVHYQ YGDMVTFSCY SGYMLEGSLR SVCLENGTWT PPPICRAVCR FPCQNGGVCQ3480
 3481 RPNACSCPDG WMGRLCEEPI CILPCLNGGR CVAPYRCDCP AGWTGSRCHT VTSDGSLEGN3540
 3541 TGGVACKDGQ DRIRKRARSS FKALVCSRRA QEPWRVLGRN STQ

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