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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109474905
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNISENVLST GSSLASQVHA AAVNGDKGAL QRLIVGNSAL KDKEDQFGRT PLMYCVLADR  60
   61 LDCADALLKA GADVNKTDHS RRTALHLAAQ KGNYRFMKLL LTRRANWMQK DLEEMTPLHL 120
  121 STRHRSPKCL ALLLKFMAPG EVDTQDKNKQ TALHWSAYYN NPEHAKLLIK HDSNIGIPDV 180
  181 EGKIPLHWAA NHKDASAVHT VRCILDAAPT ESLLNWQDYE GRTPLHFAVA DGNLTVVDVL 240
  241 TSYESCNITS YDNLFRTPLH WAALLGHREC VQINKIRNEK GDITTDSEGP DVPHHCAVSN 300
  301 KVFLQETVKV FLTHPSVRDD SDLEGRTSFM WAAGKGSDDV LRTMLSLKSD IDINMADKYG 360
  361 GTALHAAALS GHVSTVKLLL DNDAQVDATD VMKHTPLFRA CEMGHRDVIQ TLIKGGARVD 420
  421 LVDQDGHSLL HWAALGGNAD VCQILIENKI NPNVQDYAGR TPLQCAAYGG YINCMAVLME 480
  481 NNADPNIQDK EGRTALHWSC NNGYLDAIKL LLDFAAFPNQ MENNEERYTP LDYALLGERH 540
  541 EVIQFMLEHG ALSIAAIQDI AAFKIQAVYK GYKVRKAFRD RKNLLMKHEQ LRKDAAAKKR 600
  601 EEENKRKEAE QKGQPDTDPP RPQVLPCPPS PQNEPSRQSA APSKQPPASH TVQSPDPEQG 660
  661 RPAGQCPGRA SHRDCSSDLQ GTASRKPSES PREHCRGASA GVHPRSCEDG DSYRHQGTSS 720
  721 AEKCRGETSG EHQRCEQGPS RARQPVSTGS AGPAEKGEDS SPAITSASQR DRPRKPSKRQ 780
  781 DGAPRSRGAS QKRRTHQLRD RCSPAGSSRP GSAKAEVARA DQSSVHHDTP RNKVTQDKLV 840
  841 GGVSSDVPLS TEELGSGCQK LYEDLCASPE NNVAHGPRPG QSVNIHLLPV EQRLLIIQRE 900
  901 RSRKELFRRK NKAAAVIQRA WRSYQLRKHL SRLLHLKQLG ARDVLRCTQL CAALLLQVWR 960
  961 KELELKFPKS ISVSRTSKSP SKGMSAAKSA RHSVLRQIYG CSQEGKVHHP IRSPKVPPVL1020
 1021 HLSSVNSLQS IHLDSSGRSK KFSYNLQPAS QSKNKPKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle