YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIMP4_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPWSPLAALS WALVLRLLAL LWPPGRGEAC SCAPAHPQQH VCHSALVIRA KISSEKVVPA  60
   61 SEDPADTQKM IRYEIKQIKM FKGFEKAKDI QYVYTPFDSS LCGVKLETNS QKQYLLTGQI 120
  121 LSDGKVFIHL CNYIEPWEDL SLVQRESLNH HYHQNCGCQI TTCYAVPCTI SAPDECLWTD 180
  181 WLLERKLYGY QAQHYVCMKH VDGICSWYRG HLHLRKEYVD IVQP

Type	Start	End	Confidence
Signal Peptide	1	27	0.99
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	224	0.99