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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109473951
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.70
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPGPGVFG APRLAPRLLL WLLLLLLLLL QGPESAVAQA GPRAPCAAAC TCAGDSLDCS  60
   61 GRGLATLPRD MPSWTRSLNL SYNRLSEIDP AAFEDLTNLQ EVYLNSNELT AVPSLGAASM 120
  121 HVVSLFLQHN KILSVDGSQL KSYLSLEVLD LSSNNITEIR SSCFPNGLRV RELNLASNRI 180
  181 SILESGAFDG LSRSLLTLRL SKNRITQLPV KAFKLPRLTQ LDLNRNRIRL IEGLTFQGLD 240
  241 SLEVLKLQRN NLSKLTDGAF WGLSKMHVLH LEYNSLVEVN SGSLYGLTAL HQLHLSNNSI 300
  301 SRIQRDGWSF CQKLHELILS FNNLTRLDEE SLAELSGLSI LRLSHNAISH IAEGAFKGLK 360
  361 SLRVLELDHN EISGTIEDTS GAFMGLDNLS KLTLFGNKIK SVAKRAFSGL ENLEHLNLGE 420
  421 NAIRSIQFDA FAKMKNLKEL YISSESFLCD CQLKWLPPWL VSRMLQAFVT ATCAHPESLK 480
  481 GQSIFSVLPD SFVCDDFPKP QIITQPETTM AVVGKDIRFT CSAASSSSSP MTFAWKKDNE 540
  541 VLTNADMENF AHVRAQDGEV MEYTTILHLR HVTFGHEGRY QCVITNHFGS TYSHKARLTV 600
  601 NVLPSFTKIP HDIAIRTGTT ARLECAATGH PNPQIAWQKD GGTDFPAARE RRMHVMPDDD 660
  661 VFFITDVKVD DMGVYSCTAQ NSAGSVSANA TLTVLETPSL AVPLEDRVVT VGETVAFQCK 720
  721 ATGSPTPRIT WLKGGRPLSL TERHHFTPGN QLLVVQNVEA EDAGRYTCEM SNPLGTERAH 780
  781 SQLSILPTPG CRKDGSTVGI FTIAVVCSIV LTSLVWVCII YQTRKKSEEY SVTNTDETIV 840
  841 PPDVPSYLSS QGTLSDRQET VVRTEGGPQA NGHIESNGVC LRDPSLFPEV DVHSFACRQP 900
  901 KLCVGYTREP WKVTEKADRT TAPHPTAHSG SAVCSDCRSD TASQPQEQAF HPQTVPRDSG 960
  961 QPGTSSSQEL RQHDRECSPH HPYSGTVDGP HALSGGSLYP SNHDRILPSL RNKAACADGK1020
 1021 GDSSWTLAKL QEADCIDLKP SGSPELMEDA ISTEAQHLLV SNGQLPKACD SNPDSVPLKG1080
 1081 QVTGRRRGPL LLAPKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle