YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109472966, gi...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGAAAAAAA AMLPAQEAAK LYHTNYVRNS RAIGVLWAIF TICFAIVNVV CFIQPYWIGD  60
   61 GVDTPQAGYF GLFHYCIGNG FSRELTCRGS FTDFSTLPSG AFKAASFFIG LSMMLIIACI 120
  121 VCFTLFFFCN TATVYKICAW MQLTSAACLV LGCMIFPDGW DSDEVKRMCG EKTDKYTLGA 180
  181 CSVRWAYILA IIGILDALIL SFLAFVLGNR QDSLMAEELK AENKDDGNA

Type	Start	End	Confidence
Cytoplasmic	1	32	0.89
Transmembrane Helix	33	58	0.86
Non-Cytoplasmic	59	103	0.85
Transmembrane Helix	104	128	0.90
Cytoplasmic	129	136	0.72
Transmembrane Helix	137	158	0.88
Non-Cytoplasmic	159	185	0.82
Transmembrane Helix	186	207	0.95
Cytoplasmic	208	229	0.83