YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109472356
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRRSCCRRP LPVVASLGAA LLFLCAAPRA LRPAFENKVL GSGWFGGERK SPLQLLRELD  60
   61 QGPRSAMAEV HQQRRELLRR ACSRHTRRQR LLQPEDLRHV LVDDKHRLLY CYVPKVACTN 120
  121 WKRVLLALRG RGDPGAIPAH EAHEPGLLPS LADFAPAEVN RRLRDYLTFL FVREPFERLA 180
  181 SAYRNKLARP HSAAFQRRYG TRIVRRLRPH AQPDALARGH DVRFAEFLAY LLDPRTRRYE 240
  241 PFNEHWERAH ALCHPCLVRY DVVGKFETLA DDAAFVLHLV GEPGLRFPAP PLRPEKDLTR 300
  301 VQARRLFQDI SPFYQRRLFD LYKMDFLLFN YSAPSYLRLQ

Type	Start	End	Confidence
Signal Peptide	1	30	0.97
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	340	0.99