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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109472338
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGRAGPLFS GGCGSDASAG PKMDLPAVLA APATRGDQHG GGPSRLRRGT GPSLGAGPGR  60
   61 RRLLLLRSPE DGGPGPRQEE APGPSPPPPE DGGDSFVVLL EVPRAADTHE QEETEPDSGA 120
  121 SPTEQVPAAA PGAALAGTVT IHNQDLLVRF DRGVFTLAAA PAPATQGLHP ATTPGLEPSS 180
  181 AAASRRGPVA ASAGSPAYRC PEPQCALSFA KKHQLKVHLL THGSLQGRRP FKCPLDGCGW 240
  241 AFTTSYKLKR HLQSHDKLRP FSCPVGGCGK KFTTVYNLKA HMKGHEQESL FKCEVCAERF 300
  301 PTHAKLNSHQ RSHFEPERPY KCDFPGCEKT FITVSALFSH NRAHFREQEL FSCSFPGCNK 360
  361 QYDKACRLKI HLRSHTGERP FICDSDSCGW TFTSMSKLLR HKRKHDDDRR FTCPVEGCGK 420
  421 SFTRAEHLKG HSITHLGTKP FECPVEGCCA RFSARSSLYI HSKKHLQDVG TPKSRCPVSS 480
  481 CNRLFTSKHS MKAHMVRQHS RRQDLVPQLE APSSLTPSSE LSSPGQSELT NIDLAALFSD 540
  541 TPANSSSSTA GSDEALNSGI LTIDVTSVSS SLGGNLPTNN NSLGPMDPLV LVAHSDMPPS 600
  601 LDSPLVLGTP ATVLQPGSFS ADDSQAMSTG AVGCLVALPM RNLSQDSPAL TPSNNLTALG 660
  661 TTPTSSDTTQ ETASVPDLLV PIKVEQDLSP VPDVVQGQKE SHGPSVLSSS AERLGAQKDS 720
  721 ELSAGTGSLY LV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle