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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109470768, gi...
Protein type: Transmembrane
Type Confidence: 0.57
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRERSQDSQA GLTLYVGLFG HLGMLHRTKY SRFRNESITS LDEGSPGGSV GNKGSSPPPY  60
   61 AALTPHLPAE DATVPNQESP TALCTLIPRM ASMKLANPVT FLSLKTFCLG SKQVPRLKLQ 120
  121 ENQDQTPSSP ASPETSLNST GPAPTPLPDQ VGCRPTSLRP DTCPLPGPGE PNPRSKQDGP 180
  181 PLQHLLGNGL NYCVRYMGCI EVLQSMRSLD FGMRTQVTRE AISRLCEAVP GVHGAIKKRK 240
  241 APVKFLTTVL GKSNLQFSGM NIKLTVSTSS LTLMNLDNQQ IIANHQMQSI SFASGGDPDT 300
  301 TDYVAYVAKD PVNQRACHIL ECRSGTAQDI ISTIGQAFEL RFKQYLKNPS LNTWEREEVL 360
  361 VDGTSEDRGH DYYNSIPGKQ PPAGGIADVR IQVQADPVAY CPIRCEKLCY LPGTSTCSGV 420
  421 YKNCMGRSRP IGIPHERAMQ SDAASLRHFW RVDLFDDPCY VNTQNMRGCA GNQSSTLPQG 480
  481 SPWHLGKAPE TVQPGATAKP GSSHALPHIK QQLWSEECFH GRLSRGAAER LLVKDGDFLV 540
  541 RESVTSPGQF VLSGLQGGQA KHLLLVDPEG KVRTKDHVFD NVGHLIKYHM DNSLPIISSG 600
  601 SEVSLKQPVK KHNNPGLSHS KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle