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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109470617, gi...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METMLKSNPQ MQQRNNHSGQ ETSLWSSGFG MKMEAITPFL GKYRPFMGRC CQTCTPKSWE  60
   61 SLFHRSIMDL GFCNVILVKE ENTRFRGWLV RRLCYFLWSL EQHIPTSSDA SQMIMENTGV 120
  121 QNILLGKVPG AAGEGQAPDL VKKEVQRILG HIQTTPRPFL LRLFSWALLW FLNRLFLNVQ 180
  181 LHKGQMKMVH KAAQEGSPLV FLSTHKSLLD GFLLPFVLFS QGLGVLRVAL DSRTCSPALR 240
  241 ALLRKLGGLF LPPEANLSLD SSEGILARAV VRATVEQLLT SGQPLLIFLE EAPGYPGPRL 300
  301 SALGQAWLGL VVQAVQAGIV PDATLVPVAT AYDLVPDAPC NMTHDLAPLG LWTGALAIFR 360
  361 RLCNCWGCNR RVCVRVHLAQ PFSLQEYTIN ARSCWGSRQT LEHLLQPIVL GECSVVPDTE 420
  421 KEQEWTPPTS LLLALKEEDQ LLVRRLSRHV LSASVASSAV MSTAIMATLL LLKHQKGVVL 480
  481 SQLLGEFSWL TEETLLRGFD VGFSGQLRCL AQHTLSLLRA HVVLLRVHQG DLVVVPRPGP 540
  541 GLTHLARLSM ELLPTFLSEA VGACAVRGLL AGRVPPEGPW ELQGIELLSQ NELYRQILLL 600
  601 LHLLPQDLLL PQPCQSSYCY CQEVLDRLIQ CGLLVAEETP GSRPACDTGR QHLSAKLLWK 660
  661 PSGDFTDSES DDFEEPGGRC FRLSQQSRCP DFFLFLCRLL SPILKAFAQA ATFLHLGQLP 720
  721 DSEVGYSEKL LQFLQACAQE EGIFECADPN LAISAIWTFK DLGVLQQIPS PTGPQLHLSP 780
  781 TFASRDNQDK LEQFIRQFIC S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle