YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109469692
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHGPDAKTG DSPAGREDPP AAEEQRGAAQ PSLPQLPRRP QLLEEDAGPE EDPAEAAESS  60
   61 EPARGDPEPA TASGEAGPGP KATGGTVPPI GFVGEPPPYA PPDPKAVALL YPPFPQVPVL 120
  121 FQPAPGPAAL YPPAPGPLFP PPGGASFPFP TRRHLVAYSG LDCVLHSNER TPAAWYGSPV 180
  181 AGGPAPMQVE HRPLPKDFMM ESVLVTLFCC LLTGLIAIVY SHETRAALGR GDLAQAEEAS 240
  241 RKARSLVLFS LLFGVFVSTS WVIYVVVALY LP

Type	Start	End	Confidence
Non-Cytoplasmic	1	201	0.78
Transmembrane Helix	202	221	0.92
Cytoplasmic	222	245	0.84
Transmembrane Helix	246	268	0.91
Non-Cytoplasmic	269	272	0.72