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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109469649
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARELMQHYF AGPECRLCPH PTPESLTFWT PSSVAPLDGD NIAIFCPEVE VNDHQVPTGT  60
   61 STPIMNMDLA MTDDQEWVWP VLEMKCLLLA VTLFGLLAIL QAQDDLPFLS DEKKVWQSGG 120
  121 GVEVYVKGTP ERRWWSVTMN QAFRELIGVW ATCGEKGKKA KGSSPRWPSC WKLKFSRQDL 180
  181 LRDRSTGVCG PGLEYVPQDK GLDATAREGQ CFLCTTCISG AASLGSVRET LLLLFRLLAA 240
  241 GFPALWCGLS FPDPFYFCFH VSSLRVTGSA TTYVVFLKLF LETAEQHFMV GHKVIYYVFT 300
  301 DRPADVPQVP LGAGRRLVVL AVRNYTRWQD VSMHRMEIIS HFSEQRFWHE VDYLVCGDVD 360
  361 MKFRDHVGVE ILSALFGTLH PGFYRSRRES FTYERRPQSQ AYIPWDQGDF YYMGAFFGGS 420
  421 VVEVHHLTKA CHQAMVEDQD NGIEAVWHDE SHLNKYLLYH KPTKVLSPEY MWDQQLLGWP 480
  481 SIMKKLRYVA VPKNHQAIRN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle