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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109469620
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAGREERRV VPGKTSGFGG GASAQGRTGA RKHVMAVARV KGQRAGGTPN MAAARAVARG  60
   61 PGADARRPLS PQAARGPRLL LLLAVVAAVG PQEGGGARLY RVGEDAVWLL DSGSVRSATG 120
  121 NSSAAWLVQF HSSWCGHCIG YAPTWRALAA DVRDWAAAIR VAALDCAEEK NQDVCRTYDI 180
  181 HFYPTFRYFR AFTKEFTTGE NFKGPDRELR TVRQTMIDFL QNHTEGSRPP ACPPLDPIQS 240
  241 SDILSFMDSH SGQYHAVVFE SNGSYVGREV ILDLIPYDNI MVSRALDTDK AFLGTLGISS 300
  301 VPSCYLIYPN GSHGLVNVAK PLRSFFSSYL KSLPDVRKKS LSLPEKPNKE ENSEVVIWKE 360
  361 FDRAKLYTAD LESGLHYLLR VELAAHRSLA GAQLKTFKDF VTVIAKLFPG RPPVKKLLET 420
  421 LHEWLANLPL DKIPYNAILD LVNNKMQISG LFLTSHITWV GCQGSRLELR GYPCSLWKLF 480
  481 HTLTVQASTH PEALVGTGFE GDPQAVLQTM RRYIRTFFGC KECGEHFEEM AKESMDSVKT 540
  541 ADQAVLWLWR KHNMVNSRLA GHLSEDPKFP KVPWPTPDLC PVCHEEIKGL DSWDEEQVLV 600
  601 FLKQHYSRDN LVDTYSVDQG SPGEWEGMGR RQEEGKGLNP SGKAWGHQDT ESLRPAHILG 660
  661 PRTDLSKSLH HRLDLRLQSP QGPQTLEEAK AVVPFLGVGF SSLDMSLCVV LYVASSLFLM 720
  721 IMYFFFRVRS KRWKVRLYHP AV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle