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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149039000, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWARSHLCS ALSLAAVSAR GATMEGAAYR WLSAWPAPQE PSMEYQDAVR TLNTLQTNAS  60
   61 CLEEVKRQRS DPQAQLEAME VYLARSGLQV EDLNQLKIIH VTGTKGKGST CAFTERILRN 120
  121 YGLKTGFFSS PHLVQVRERI RINGKPISPE LFTKYFWHLY QQLEEFKDDS HISMPSYFRF 180
  181 LTLMAFHVFL QEKVDLAVVE VGIGGAFDCT NIIRKPVVCG VSSLGIDHTS LLGDTVEKIA 240
  241 WQKGGIFKPG VPAFTVLQPE GPLAVLRDRA QQISCPLYLC PPLEALEQVG LPLSLGLEGE 300
  301 HQRHNAALAL QLARCWLEQQ NYHDIQELKA SKPSIRWQLP LAPVFRPTPH MRRGLRDTEW 360
  361 PGRTQVLQRG PVTWYLDGAH TTSSVQACVH WYCQSLERSR RTDGGHEVHI LLFNSTGDRD 420
  421 SAALLKLLQP CHFDYAVFCP NVTEISSIGN ADQQNFTVTL DQVLLRCLQH QKHWNCLAEK 480
  481 QASSNLWGSC GPESARPGSL LLAPHPPQPT STSSLVFSCI SHALQWISQG RDPIFQPESP 540
  541 PRNLLNHPTA NSGASILREA AAIHVLVTGS LHLVGGALRL LDPSMSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle