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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MA1B1_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPPPPAPAP HRDFISVTLS LGESYDNSKS RRRRSCWRKW KQLSRLQRNV ILFVLGFLIL  60
   61 CGFLYSLQVS DQWKALSGSR AEVEKMKLEV LPVLPAPQKE SAEPEGFADI LSQKRQRHLR 120
  121 RGPPHLQIRP PNTVSKDGMQ DDAKEREAAL GKAQQEENTQ RTVISWRGAV IEPEQATEPP 180
  181 SKRAEASIKP LFLASRIWKE PAPPNERQKG VIEAFLHAWK GYQKFAWGHD ELKPVSKTFS 240
  241 EWFGLGLTLI DALDTMWILG LKQEFKEARK WVSENLDFQK NVDVNLFEST IRILGGLLSA 300
  301 YHLSGDSLFL SKAEDFGNRL MPAFTTPSKI PYSDVNIGTG FAHSPQWTSD STVAEVTSIQ 360
  361 LEFRELSRLT GIKKFQEAVE EVTKHIHSLS GKKDGLVPMF INTNSGLFTH PGVFTLGARA 420
  421 DSYYEYLLKQ WIQGGKKETQ LLEDYVRAIE GIKAHLLRQS QPRKLTFVGE LAHGRFSAKM 480
  481 DHLVCFLPGT LALGVHHGLP ADHMDLARAL METCYQMNQQ METGLSPEIA HFNMYPRADH 540
  541 KDVEVKPADR HNLLRPETVE SLFYLYRVTK DRKYQDWGWE ILQSFNKYTR VPSGGYSSIN 600
  601 NVQNSHKPEP RDKMESFFVG ETLKYLYLLF SDDLELLGLD TCVFNTEAHP LPIWSPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle