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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109470154
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSYAVSTL LVAETGRGPE PEAFLATRIA PPVATNSPPL LAFLSPPLSP ASTGHAAALH  60
   61 LLGRSSLWPT VASCATLVSG RFVLNVPHQE CMAAEAMCRP RPRGVALQEA VMLLLYFGVH 120
  121 FRVPTGHSYN LDPESALLYQ GPSGTLFGYS VVLHSHGTKR WLIVGAPTAS WLANASVVNP 180
  181 GAIYRCRIGK NPNQICEQLQ LGSPSGEPCG KTCLEERDNQ WLGVTISRQP GENGSIVTCG 240
  241 HRWKNIFYMK NNNKLPTGVC YGMPSDLRTE LSKRMAPCYQ DFVRKFGENF ASCQAGISSF 300
  301 YTQDLIVMGA PGSSYWTGSV FVYNITTNKY KAFVDRQNQV KFGSYLGYSV GAGHFRNPHT 360
  361 TEVVGGAPQH EQIGKAYIFS IDESELTIVY EMKGKKLGSY FGASVCAVDL NADGFSDLLV 420
  421 GAPMQSTIRE EGRVFVYINS GMGAVMVEME RVLVGSDKYA ARFGESMANL GDIDNDGFED 480
  481 IAIGAPQEDD LRGAVYIYNG RVDGISSTYS QRIEGRQISQ SLRMFGQSIS GQIDADNNGY 540
  541 VDVAVGAFQS DSAVLLRTRP VVIVEASLSH PESVNRTKFD CTENGLLSVC VDLKLCFSYK 600
  601 GKEVPGYIVL FYNVSLDVHR KAESPSRFYF FSNGTSDMIT RSIRVSSSGE KCRTHQAFMR 660
  661 KDVRDILTPI QVEATYHLGH HVITKRNTEE FPPLQPILQQ KKEKDIIRKT INFARFCAYE 720
  721 NCSADLQVSA KVGFLKPYEN KTYLAVGSMK TIMLNVSLFN AGDDAYETTL NVQLPTGLYF 780
  781 IKILDLEEKQ INCDVTESSG VVKLACSLGY IYVDRLSRID ISFLLDVSSL SRAHEDLSIN 840
  841 VHASCENEGK LDQVKDNRVT LVIPLRYEVM LAVHGFVTPT SFVYGSSEEN EPEMCMAEKL 900
  901 NLTFHVINTG ISMAPNVSVK IMVPNSFLPR NDKLFNVLDV QATMGQCQFE HYGRECALAQ 960
  961 QKGIAGTLTD LVKFLSKTDK RLLYCMKADR HCLDFLCNFG KMESGKEASV HIQLEGRPSV1020
 1021 LEMDETSSLK FEIKATAFPE PHPKVIELNK DENIAHVYLE GLHHQRPKRH FTIVIVTISL1080
 1081 LLGLIVLLLI SCVMWKAGFF KRQYKSILQE ENRRDSWSYV NSKSNDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle