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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109469845
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSVWFGFWR GAEAEELAGV WEVSGMRDAS QREPAETEER RGGAGPGPRQ AWPRREALLP  60
   61 SLRLLQPPPL QLPERALRPP EHLPRRSRSR MVRGARQSQQ PRSRLAPRLS GTVEKPPRKR 120
  121 KSRTEFTLKE TMSSGGAEDD IPQGERKTVT DFCYLLDKSK QLFNGLRDLP QYGQKQWQSY 180
  181 FGRTFDVYTK LWKFQQQHRQ VLDNRYGLKR WQIGEIASKI GQLYYHYYLR TSETSYLNEA 240
  241 FSFYSAIRQR SYYSQVNKED RPELVVKKLR YYARFIVVCL LLNKMDVVKD LVKELSDEIE 300
  301 DYTHRFNTED QVEWNLVLQE VAAFIEADPV MVLNDDNTIV ITSNRLAETG APLLEQGMIV 360
  361 GQLSLADALI IGNCNNQVKF SELTVDMFRM LQALEREPMN LASQMNKPGI QEPADKPTRR 420
  421 ENPHKYLLYK PTFSQLYTFL AASFKELPAN SVLLIYLSAT GVFPTGRSDG EGPYDFGGVL 480
  481 TNSNRDIING DAIHKRNQSH KEMHCLHPGD LYPFTRKPLF IIVDSSNSVA YKNFTNLFGQ 540
  541 PLVCLLSPTA YPKALQDQSQ RGSLFTLFLN NPLMAFLFVS GLSSMRRGLW EKCQEYLRKI 600
  601 NRDIAQLLTH SRSIDQAFLQ FFGDEFLRLL LTRFVFCSAT MRMHKAFRET RNYPESYPQL 660
  661 PRDETVENPH LQKHILELAS ILDVRNIFFE NSMDDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle