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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TRPM7_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKSWIEST LTKRECVYII PSSKDPHRCL PGCQICQQLV RCFCGRLVKQ HACFTASLAT  60
   61 KYSDVKLGEH FNQAIEEWSV EKHTEQSPTD AYGVINFQGG SHSYRAKYVR LSYDTKPEII 120
  121 LQLLLKEWQM ELPKLVISVH GGMQKFELHP RIKQLLGKGL IKAAVTTGAW ILTGGVNTGV 180
  181 AKHVGDALKE HASRSSRKIC TIGIAPWGVI ENRNDLVGRD VVAPYQTLLN PLSKLNVLNN 240
  241 LHSHFILVDD GTVGKYGAEV RLRRELEKTI NQQRIHARIG QGVPVVALIF EGGPNVILTV 300
  301 LEYLQESPPV PVVVCEGTGR AADLLAYIHK QTEEGGNLPD AAEPDIISTI KKTFNFGQSE 360
  361 AVHLFQTMME CMKKKELITV FHIGSEDHQD IDVAILTALX XGTNASAFDQ LILTLAWDRV 420
  421 DIAKNHVFVY GQQWLVGSLE QAMLDALVMD RVSFVKLLIE NGVSMHKFLT IPRLEELYNT 480
  481 KQGPTNPMLF HLIRDVKQGN LPPGYKITLI DIGLVIEYLM GGTYRCTYTR KRFRLIYNSL 540
  541 GGNNRRSGRN ASSSTPQLRK SHETFGNRAD KKEKMRHNHF IKTAQPYRPK MDASMEEGKK 600
  601 KRTKDEIVDI DDPETKRFPY PLNELLIWAC LMKRQVMARF LWQHGEESMA KALVACKIYR 660
  661 SMAYEAKQSD LVDDTSEELK QYSNDFGQLA VELLEQSFRQ DETMAMKLLT YELKNWSNST 720
  721 CLKLAVSSRL RPFVAHTCTQ MLLSDMWMGR LNMRKNSWYK VILSILVPPA ILMLEYKTKA 780
  781 EMSHIPQSQD AHQMTMEDSE NNFHNITEEI PMEVFKEVKI LDSSEGKNEM EIHIKSKKLP 840
  841 ITRKFYAFYH APIVKFWFNT LAYLGFLMLY TFVVLVQMEQ LPSVQEWIVI AYIFTYAIEK 900
  901 IREVFMSEAG KISQKIKVWF SDYFNVSDTI AIISFFVGFG LRFGAKWNYI NAYDNHVFVA 960
  961 GRLIYCLNII FWYVRLLDFL AVNQQAGPYV MMIGKMVANM FYIVVIMALV LLSFGVPRKA1020
 1021 ILYPHEEPSW SLAKDIVFHP YWMIFGEVYA YEIDVCANDS ALPTICGPGT WLTPFLQAVY1080
 1081 LFVQYIIMVN LLIAFFNNVY LQVKAISNIV WKYQRYHFIM AYHEKPVLPP PLIILSHIVS1140
 1141 LFCCICKRRK KDKTSDGPKL FLTEEDQKKL HDFEEQCVEM YFDEKDDKFN SGSEERIRVT1200
 1201 FERVEQMSIQ IKEVGDRVNY IKRSLQSLDS QIGHLQDLSA LTVDTLKTLT AQKASEASKV1260
 1261 HNEITRELSI SKHLAQNLID DVPVRPMWKK PSVVNTLSSS LPQGDRESNN PFLCNIFMKD1320
 1321 EKDPQYNLFG QDLPVIPQRK EFNIPEAGSS CGALFPSAVS PPELRQRRHG VEMLKIFNKN1380
 1381 QKLGSSPNSS PHMSSPPTKF SVSTPSQPSC KSHLESTTKD PEPIFYKAAE GDNIEFGAFV1440
 1441 GHRDSMDLQR FKETSNKIRE LLSNDTPENT LKHVGAAGYN ECHKTPTSLH SETESCSRRA1500
 1501 STEDSPDVDS RAALLPDWLR DRPTNREMPS EGGTLNGLAS PFKPVLDTNY YYSAVERNNL1560
 1561 MRLSQSIPFV PVPPRGEPVT VYRLEESSPS ILNNSMSSWS QLGLCAKIEF LSKEEMGGGL1620
 1621 RRAVKVLCTW SEHDVLRSGH LYIIKSFLPE VINTWSSIYK EDTVLHLCLR EIQQQRAAQK1680
 1681 LTFAFNQMKP KSIPYSPRFL EVFLLYCHSA GQWFAVEECM TGEFRKYNNN NGDEIIPTNT1740
 1741 LEEIMLAFSH WTYEYTRGEL LVLDLQGVGE NLTDPSVIKA EEKRSCDMVF GPANLGEDAI1800
 1801 KNFRAKHHCN SCCRKLKLPD LKRNDYTPDK IIFPQDESSD LNLQAGNSTK ESEATNSVRL1860
 1861 ML

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