YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109462528
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPKLTLHLS TLLLSEDITQ LAAWIRNSQA FSHFSGAHPI FCEFCPLLSV SRNCALFISH  60
   61 SHVHIRDSSL ALELGKQTAP PFSSVRLQSI LYAAARAHPT PEGDLESTAQ LDGLGECRRE 120
  121 AEAGLGGWVK VMHCDSEIKL RGWGKKVDRA KGPLASPGTE SRRSVDPRAL SGDLGILEPP 180
  181 PSTCCGASSL LQKADPHRES RFQRIHRIYL LHLPYEKSGA TRRPSPRQGH PEKVPHFKAG 240
  241 CQKKQETHSL SRLFPGDPAF PEQNGPLENV IALTVPRDWT PERCGPEFLN VGAWGFHTVN 300
  301 RGKGTWALVS MPCSGLVTTG GLFCEEFGRH PACFLLDASF PEQQSRQLER CGLVSSPEKK 360
  361 GLQKPFEGFL PCANLPQKFL RDLCVRQEKG GLVSVLTYAC IPYVHTSDSR HLSKSLRLQP 420
  421 AEEFGNITSD KKYQDLRHQG LLSVQPLSAF LYTKLSLSSL GTQIALCLGV SQIQTLSVRL 480
  481 HRELLNTTDE LQYPLNAQQI HGPGESPNLP ASRNFISSLF TSQDVKQANP ESEQLCPGLE 540
  541 FGKPWTSGQV KVTQELRNIQ GEQMTKLQAK HQAECDLLED MRTFSQKKAA IEREYAQGIQ 600
  601 KLASQYLKRD WPGIKTDDRN DYRSMYPVWK SFLEATMQVA QSRINICENY KNFISEPARA 660
  661 VRSLTSRELK GCVDQLTKIQ TELQETVKDL VKGKKKYFET EQMAHAVREK ADIEAKSKLS 720
  721 LFQSRISLQK ASVKLKARRT ECNTKATHAR NDYLLTLAAA NAHQDRYYQT DLLNIMKALD 780
  781 GNVYDHLKDY LIAFSRTELE ACQAMQNTFQ FLLENSSKVV RDYNLQLFLQ ENAVFHKPQP 840
  841 FQFQPCDSDT SLKAAQLVDI ELSPVSALRM TIAESRQLES ETGTTEEHSL NKEARKWATR 900
  901 VAREHKNIVH QQRVLNELEC HGVAVSEQSR AELEQKIDEA RENIRKAEII KLKAEARLDL 960
  961 LKQIGVSVDT WLKSAMNQVM EELENERWAR PPAVTSNGTL HSLNADAERE EGEEFEDNMD1020
 1021 VFDDSSSSPS GTLRNYPLTC KVVYSYKASQ PDELTIEEHE VLEVIEDGDM EDWVKARNKV1080
 1081 GQVGYVPEKY LQFPTSNSLL SMLQSLAALD SRSHTSSNST EAELVSGSLN GDASVCFVKA1140
 1141 LYDYEGQTDD ELSFPEGAII RIVNKENQDD DGFWEGEFSG RIGVFPSVLV EELSASENGD1200
 1201 TPWTRDIQVS PSPKPHTSLP PLPLYDQPPS SPYPSPDKRS SQFFPRSPSA NENCLHAESP1260
 1261 GFSQASRQTP DTSYGKLRPV SLPP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle