YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109468655
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGMSLTFLS QCPAVSSNSC GTRETQQPSN HPLLPDVREL IIGTPSSAEA FIAYISGNLE  60
   61 SRDFQCCDRE MPGQPLAASR NYNSHYAPRS AGLNPGCTTI PRMLWEERGG DAATLRLRPE 120
  121 TLNLKVGGPG VMGRELKVEG SSDSWHSEEK GLRTGESKNL ECRMAAASEA TCVEGDEWEL 180
  181 SKENVQPLRH GRIMATLQGA LAQQESACST TLQQQKWAFE SEIRFYSGND PLDVWDRYIN 240
  241 WTEQNYPQGG KESNMSTLLE RAIEALQGEK RYYSDPRFLN LWIKLGHLCN EPLDMYSYLH 300
  301 SQGIGISLAQ FYISWAEEYE ARENFKKADI VFQQGIECKA EPLDRLQSQH RQFQARVSRQ 360
  361 ALLALGNEEE EVLGSSEPQR STLAELKSRG KKMARAPINR VGGALKAPGQ SRGFLNTLPQ 420
  421 PVHSNRRITV FDENADSASR PELSKPVAQP WMAPPVPRAK ENELQPGPWN TDRPLEYRPH 480
  481 SNPASVTSVP SVLPNFTPYV EESAQQTVMT PCKIEPSINH VLSTRKPGRE EGDPLQRVQS 540
  541 HQQGCEEKKE KMMYCKEKIY AGVGEFSFEE IRAEVFRKKL KERREAELLT SAKKREEMQK 600
  601 QIEEMERKLK AMQTIQQERA GDQQEERMLS KDSARLEIAS ESQEMSGVPP SCSIWPLSSN 660
  661 PREISPAENI LQEQPETKGP SMPFSIFDES LSDKKDKSPA TDGPQVLNAQ RRPLTVLKTT 720
  721 EVIPANEDIS PDVCDELTEI EPLSEDAIIT GFRNGILCPN PEDTCDFARA ARFASTPFHE 780
  781 ILPSKSIASD PKEGLQEEDL DGKATEGHHI VHLQTLSVKK LSPIIEDSRE ATHSSGFSRS 840
  841 SSSVTSTSSI KGFQILEKLE LTTDAAENAI QSPWCSHYRL QLLKSLPELS AFAEFSVEDR 900
  901 PMPMLELGKE IELGHEDYCI KQEHLTCEDY RLFWVAPRNS AELTMIKASS QPLPWDFYIN 960
  961 LKLKERLNED CDQLCSCCQY QDGHVVWYQY INCSTLQDLL QHSEFVTHEI IVLIICNLLT1020
 1021 IVEKLHKAEI VHGDLSPRSL ILRNRIHDPY DYINKDDHAV RIVDFSYSVD MRVQLDAFAY1080
 1081 SGFRTAQVLE GQKILANCSS PYQVDLLGIA DLAHLLLFKE HLHVFWDGLL WRLSQNTSEL1140
 1141 KDGELWNKFF VQILNASDKS TVFILRELAA EMSGAFDTTF HSHLNKALWK LGKVISPEAS1200
 1201 LIQQDKQSSL LQNPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle