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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109468378
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLLVGAPKA NTTQPGIIEG GQVLKCDCSS SRRCQPIEFD STGNRDYAKD DPLEFKSHQW  60
   61 FGASVRSKQD KILACAPLYH WRTEMKQERE PVGTCFLQDG TKTVEYAPCR SKNIDADGQG 120
  121 FCQGGFSIDF TKADRVLLGG PGSFYWQGQL ISDQVAEIIS KYDPNVYSIK YNNQLATRTA 180
  181 QAIFDDSYLG YSVAVGDFNG DGIEDFVSGV PRAARTLGMV YIYDGKNMSS LHNFTGEQMA 240
  241 AYFGFSVAAT DINGDDYADV FIGAPLFMDR GSDGKLQEVG QVSVSLQRAS GDFQTTKLNG 300
  301 FEVFARFGSA IAPLGDLDQD GFNDIAIAAP YGGEDKKGLV YIFNGRSTGL NSVPSQILQG 360
  361 QWAAQSMPPS FGYSMKGATD VDRNGYPDLV VGAFGVDRAV LYRARPVVTV NAGLEVYPSI 420
  421 LNQDNKICPL PGTALKVSCC SQCGCAEEGK QDLPRRPDLY FQVELLLDKL KQKGAIRRAL 480
  481 FLHNRSPGHS KDMTVFRGGQ TQCEELVAYL RDRMFYKYPL SPFVLDFLYV LDQRRGPAAP 540
  541 GPSPTGAQRP YTFSSWARDA HILLDCGEDN VCKPKLEVSV DSDQKKIYIG DDNPLTLTVK 600
  601 AQNQGEGAYE AELIVSIPPQ ADFIGVVRNN EALARLSCAF KTENQTRQVV CDLGNPMKAG 660
  661 TQLLAGLRFS VHQQSEMDTS VKFDLKIQSS NSFDNVSPVV SYKVDLAVLA AVEIRGVSSP 720
  721 DHIFLPIPNW EYKETPETEE DVGPVVQHIY ELRNNGPSSF SKAILNLQWP YKYNNNTLLY 780
  781 ILHYDIDGPM NCTADTEINP LRIKTPEKND TAAEQGGRNH LITKRDLSLS EGDVHTLGCG 840
  841 TAQCLQITCQ VGRLDRGKSA ILYVKSLLWT ETFMNKENQN HSYSLKSSAS FNIIEFPYKN 900
  901 LPIEDLFNST LVTTNITWGI QPAPMPVPVW VIILAVLAGL LLLAVLVFVM YRMGFFKRVR 960
  961 PPQEEQEREQ LQPHENGEGN SET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle