YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109468085
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLVPFQALG FWGTLLFLIF LEPSWEQEQT YIISTPIVFR VGAPENVTVQ AYGYTEAFDT  60
   61 TISVKSYPNK NVNYSSGTVE LSPENKFQNS AILTIQAQEL SEEQNWFSNV YSEVVSKHFS 120
  121 KLEIMPIVYD NSSLFVHTDK PVYTPEQPVK VAVYSVDDDL EPVTRTTVLT FIDPEGSEVG 180
  181 IIGGRNGTGI ASFPDFKIPS NPKLGRWTIK ANYREDASTT GTTHFEVQGH EKAFKMAVMP 240
  241 TTDLQQKMEK QDKAHVTCHQ TSDCLVQKIN EQASKYKHPV IKKCCYDGAR YNEHETCVQR 300
  301 AAHVTIGPNC VKAFSLCCEI AHQMTFKHIH MSSLRKYNIF YQNLAKHGTL TATKNTDIQP 360
  361 GRAVDTTAHT PVGYHAAQTS GTTLHLQERS VVPTECGSL

Type	Start	End	Confidence
Signal Peptide	1	26	0.73
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	399	0.99