YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109467679, gi...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTQDWGGL TEAATRGRGP QPGGKGPRRA EGTGKNSLVK GGFRRQGPKV GAHLRTRAEG  60
   61 RLGSARAPLR SAHVTRCAPI AAWRATSRPS PRARRPLPLS RKRSSRAADA AGRMVLDSVA 120
  121 RIVKVQLPAY LKQLPLPDSI TGFARLTVAE WLRLLPFLGV LALLGYLAVR PFFPKKKQQK 180
  181 DSLINLKIQK ENPKVVNEIN IEDLNLTKAA YCRCWRSKTF PACDGSHNKH NELTGDNVGP 240
  241 LILRKKEV

Type	Start	End	Confidence
Cytoplasmic	1	150	0.59
Transmembrane Helix	151	169	0.80
Non-Cytoplasmic	170	248	0.69