YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109467661
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLGAYRTRH GKVSPTTETK LLLRFTVLCV AWITVRAQGQ AIDILQQLGL GGRDVRYASS  60
   61 VTAVPSLSTP LPQGVHLTEF GVVLTDNAYI ESPLVNILPV SLRQPLTVLI GLQSLQVNNA 120
  121 FLFSIRNNNR LQFGVQLLPK KLIVHVGGKR TVTFDYSIHD ERWHSLAITV DHRVVSMFVE 180
  181 CGKRYFSGET TSEVQTFDPH SVFTLGSMNN SSAHFEGTVC QLDIVPSAVA SADYCSHLKQ 240
  241 QCPRTDASQA ERSLSHTEVV PTRYPEHTPL PRGLAGTELT QKRFTEQAPF PKGFDEAELP 300
  301 RETFTDDSKS ISNNTGNGSA TVHESHEHQT PRVRLTSFHS ENISAVTLPS YRIQAKEITT 360
  361 KGETNLTLSV PHRLPSEAGM NEEERISPLF PEFNITQHEE AAGLPSPKKA SSSIAQTNQD 420
  421 TVTNLKKAIT ANLHTNELME MERILNSTLY KVIHGPSVDN HLELRKEGEF YPDATNPMEN 480
  481 SYEPQPYEYY YYEDYNAMLD LEYLRGPKGD TGPPGPPGPM GIPGPSGKRG PRGIPGPHGN 540
  541 PGLPGLPGPK GPKGDPGLSP GQAASGEKGD PGLLGLVGPP GLQGEKGLKG HTGLPGLRGE 600
  601 QGIPGLAGNV GSPGYPGRQG LAGPEGNPGS KGVRGFIGSP GEAGQLGPEG ERGTPGVRGK 660
  661 KGPKGRQGFP GDFGDRGPAG LDGSPGLVGG IGPPGFPGIR GNVGPAGPVG PPGVPGPMGL 720
  721 SGSRGPPGIK GDKGEQGVAG EPGEPGYPGD KGAIGSPGPP GIRGKSGPSG QPGDPGPQGP 780
  781 TGPPGPEGFP GDIGIPGQNG PEGPKGHLGS RGPPGPPGLK GTQGEEGPIG PFGELGSRGK 840
  841 PGRKGYMGEP GPEGLKGETG DQGDIGKIGE TGPVGLPGEV GITGSIGEKG ERGSPGPLGP 900
  901 QGEKGVMGYP GPPGAPGPMG PIGLPGLVGA RGAPGSPGPK GQRGPRGPDG LAGDQGGHGA 960
  961 KGEKGNQGKR GLPGRAGKTG SPGERGVQGK PGLQGLPGSS GDMGPAGEPG PRGLPGDAGL1020
 1021 PGEMGVEGPP GTEGDSGLQG EPGAKGDVGP TGSEGATGEP GPRGEPGAPG EEGLQGKDGL1080
 1081 KGAPGGSGLP GEDGEKGEMG LPGTAGPVGR PGQMGPPGSE GIVGTPGERG RTGKKGDKGQ1140
 1141 TGPVGEAGSR GSPGRVGDSG PKGARGTRGA VGPLGLMGPE GEPGIPGYRG LEGQPGPSGL1200
 1201 PGPKGEKGYP GEDSTVLGPP GPRGEPGPMG ERGERGEHGE EGYKGHMGVP GLRGAAGQQG1260
 1261 PPGEPGDQGE QGLKGERGSE GPQGKKGVPG PSGKPGIPGL PGLPGPKGLQ GYHGVDGLSG1320
 1321 YPGKPGLLGK QGLPGTTGSP GRTGLAGSPG PQGGKGSSGP PGSPGVPGPK GEQGLPGQPG1380
 1381 IPGQRGQRGT QGDQGRRGEP GLKGQPGEHG NQGLTGFQGF PGPRGPEGDA GIIGIVGPKG1440
 1441 PVGQRGNTGP LGREGIIGPT GGTGPRGEKG FRGETGPQGP RGQPGPPGPP GAPGPRRQMD1500
 1501 INAAIGALIE SNSAQQMESY QNTEVTFLSQ GTEISKTLAY LSSLLSSIKN PLGTRENPAR1560
 1561 ICKDLLSCQY EVSDGKYWID PNLGCSSDAF EVFCNFSAGG QTCVSPVSVT KLEFGVGKVQ1620
 1621 MNFLHLLSSE ATHIITLHCL NTPRRTGTPA DGPELPISFK GWNGQIFEEN TLLEPQVLSD1680
 1681 DCKIQDGSWH KAKFLFHTQN PNQLPVTEVQ NLPHLRTEQK HYIESSSVCF L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle