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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109467185
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLPGCMSL AAAPAAADSA EIAELQQAVV EELGISMEEL RQFIDEELEK MDCIQQRKKQ  60
   61 LAELETWVLQ KESEVAYVDR LFDDASREVT NCESLVKDFY SKLGLQYHDS SSDDEASQPT 120
  121 EIIEIPDEDD DVLSIDSASI NLVHAKPIKQ SAGKQQASTV GCSIICQAHF DTVMLGAERQ 180
  181 KIRRNLGSVS GELSKDGDLI VSMRILGKKR LRRWHKGTLI AIQTVGLGKK YKVKFDNKGK 240
  241 SLLSGNHIAY DYHPPADKLF VGSRVVAKYK DGNQVWLYAG IVAETPNVKN KLRFLIFFDD 300
  301 GYASYVTQSE LYPICRPLKK TWEDIEDSSC RDFIEEYITA YPNRPMVLLK SGQLIKTEWE 360
  361 GTWWKSRVEE VDGSLVRILF LDDKRCEWIY RGSTRLEPMF SMKTSSASAM EKKQGGQLRT 420
  421 RPNMGAVRSK GPVVQYTQDL TSTGIQFKPM EPLQPIVPPA PLPMLPLSPQ AGDSESLESQ 480
  481 LAQSRKQVAK KSTSFRPGSV SSGHSSPTSP TLSENVPPGK IGMNQTYRSP SASVTSTPAP 540
  541 AAPSGPPAPP GPLAPPGPPA PPAFHGMLER APAEPSYRAP MEKLFYLPHV CSYTCLSRIR 600
  601 PMRNEQYRGK NPLLVPLLYD FRRMTARRRV NRKMGFHVIY KTPCGLCLRT MQEIERYLFE 660
  661 TGCDFLYLEM FCLDPYVLVD RKFQPFKPFY YILDITYGKE DVPLSCVNEI DTTPPPQVAY 720
  721 SKERIPGKGV FINTGPEFLV GCDCKDGCRD KSKCACHQLT VQATACTPGG QINPSSGYQH 780
  781 KRLEECLPTG VYECNKRCKC DPNMCTNRLV QHGLQVRLQL FKTQNKGWGI RCLDDIAKGS 840
  841 FVCIYAGKIL TDDFADKEGL EMGDEYFANL DHIESVENFK EGYESDVPSS SDSSGVDMKD 900
  901 QEDGNSGSED PEESNDDSSD DNFCKDEDFS TSSVWRSYAT RRQTRGQKES ELSEVTSKDS 960
  961 RAPDRGPPHV PITPSGSVGG CNPPSSEETP KNKVASWLSC NSVSEGGFAD SDSRSSFKTS1020
 1021 EGGDGRAGGG RGEAERASTS GLSFKDEGDS KQSKKEDPED RNKMSVVTEG SQNHGHNPPM1080
 1081 KSEGLRRPAS KISMLQSQRV VTSTQSNPDD ILTLSSSTES EGESGTSRKP TTGQTSATAV1140
 1141 DSDDIQTISS GSDGDDFEDK KNLSGPTKRQ VAVKSTRGFA LKSTHGIAIK STNMASVDKG1200
 1201 ESAPVRKNTR QFYDGEESCY IIDAKLEGNL GRYLNHSCSP NLFVQNVFVD THDLRFPWVA1260
 1261 FFASKRIRAG TELTWDYNYE VGSVEGKELL CCCGAIECRG RLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle