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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157818761, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPSPSDSSR SLTSRPSTRG LTHLRLHRPW LQALLTLGLA QVLLGILVVT FSMVASSVTT  60
   61 TESIKRSCPS WAGFSLAFSG LVGIVSWKRP FTLVISFFSL LSVLCVMLSM AGSVLSCKNA 120
  121 QLARDFRECS MEGKVCVCCP PIPLHRPCPE WGQELKVAFN STCDEARGAL KNLLFSVCGL 180
  181 TICAAIICTL SAIVCCVQIF SLDLVHVLAP ERSVSGPLGS LACTSSPPAP LLHTMLDLEE 240
  241 FVPPVPPPPY YPPEYTCSSE TDAQSITYNG SMDSPVPLYP TDCPPSYEAV MGLRRDSQAT 300
  301 LFDPQLHDGS CVCERVPSIV DVSMDSGSLV LSAIGDLPGG SSPSEDSCLL ELQGSVRSVD 360
  361 YVLFRSIQRS RAGYCLSLDC GLRGPFEDSP LPRRPPRAAR SYSCSAPEAP PPLGAPTAAR 420
  421 SCHRLEGWPP WVGPCFPELR RRVPRGGSRS TAPPPARAPV RRFSDSSGSL TPPGHRPPHR 480
  481 TPPPPLLLPR SHSDPGITTS SDIADFRDLY TKVLEEEAAS ISSADTGLCS EACLFRLARC 540
  541 PSPKLLRAHS AEKRRPVPTF QKVPLPSGPA PAHSLGDLKG SWPGRGLVTR FLQLSRKSPD 600
  601 PAGTGAHGHK QVRRSPWGRP GRESLHLRSC GDLSSGSSLR RLLSARRLEH GIRPHSLSLN 660
  661 GGSRETGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle