YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109467054
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTWWEGGRG QEQRRTKRLI IILHVGVLGP PEDAVLASCL PYLGSSSIGT LLFPLLSKGV  60
   61 SSLEKPQTNQ VSKGLQQLLG NISQFFEKDI LGRDDAFIMV SRKGWGAEAT GCSSKLGRPV 120
  121 DVLVIHHVPG LECHNQTVCS QKLRELQAYH IRNHWCDVAY NFLVGDDGKV YEGVGWNVQG 180
  181 SHDQGYNNIS LGVAFFGTQE GHSPSPVALL AMEALISHAV KKGHLSSKYI QPLLVKSEDC 240
  241 LVPPQKGKQK KVIPHLLPQQ KLDLRSKAQE PLNHRASVHR GVKISCAF

Type	Start	End	Confidence
Cytoplasmic	1	19	0.57
Transmembrane Helix	20	44	0.53
Non-Cytoplasmic	45	288	0.95