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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109466264, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPREWRSGTP RWGLCPAHQS GRAPGSPRSL PLSRAPLSRN VLHLREVLPR LSVPIPRSDR  60
   61 HQAVLRNAPA RRERERAPDP LSLSPSPESG FLSHLSASTC RARVLFLLPS SLPPFPSGPR 120
  121 LCRVAGASRL RHRRPPNKMD TAEEDICRVC RSEGTPEKPL YHPCVCTGSI KFIHQECLVQ 180
  181 WLKHSRKEYC ELCKHRFAFT PIYSPDMPSR LPIQDIFAGL VTSIGTAIRY WFHYTLVAFA 240
  241 WLGVVPLTAC RIYKCLFTGS VSSLLTLPLD MLSTENLLAD CLQGCFVVTC TLCAFISLVW 300
  301 LREQIVHGGA PIWLEHAAPP FNAAGHHQNE APVGGNGAEN PAADQPANPA GENAVLGENP 360
  361 DAQDGQAEEE EEDNEEEDDA GVEDAADANN GAQDDMNWNA LEWDRAAEEL TWERMLGLDG 420
  421 SLVFLEHVFW VVSLNTLFIL VFAFCPYHIG HFSLVGLGFE EHVQASHFEG LITTIVGYIL 480
  481 LAITLIICHA LATLVKFHRS RRLLGVCYIV VKVSLLVVVE IGVFPLICGW WLDICSLEMF 540
  541 DATLKDRELS FQSAPGTTMF LHWLVGMVYV FYFASFILLL REVLRPGVLW FLRNLNDPDF 600
  601 NPVQEMIHLP IYRHLRRFIL SVIVFGSIVL LMLWLPIRII KSLLPHFLPY NVMLYSDAPV 660
  661 SELSLELLLL QVVLPALLEQ GHTRQWLKGL VRAWTVTAGY LLDLHSYLLG DQEESENSAN 720
  721 QQVNNNQPAR NNNAVPAGEG LHAAHQAILQ QGGPVGFQPY RRPLNFPLRI FLLIVFMCIT 780
  781 LLIASLICLT LPVFAGRWLM SFWTGTAKIH ELYTAACGLY VCWLTIRAVT VLVAWMPQGR 840
  841 RVIFQKVKEW SLMIMKTLIV AVLLAGVVPL LLGLLFELVI VAPLRVPLDQ TPLFYPWQDW 900
  901 ALGVLHAKII AAITLMGPQW WLKTVIEQVY ANGIRNIDLH YIIRKLAAPV ISVLLLSLCI 960
  961 PYVIASGVVP LLGVTAEMQN LVHRRIYPFL LMVVVLMGIL SFQVRQFKRL YEHIKNDKYL1020
 1021 VGQRLVNYER KSGKQGPSTP PPVSSQE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle