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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109466047
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWILALWLLP LLCKFSLAGL PPKPENISCI FYFDRNLTCT WSPEKETNDT SYTVRMTYSY  60
   61 GKSSCTVNAT EASCSFPSYC AIAPDNCSVE VEAQNNDGKA ISAITYWDLS SIVKTEPPII 120
  121 LSVNPISNRM FQIRWEPWEK IHVFPLTCMI QFRTVNSSHW TEVNLEDCER VFNLTGLQAF 180
  181 TQYVLALRFR FSDSRYWSKW SKEETRMTME EVPHVLDLWR ILEPADVNGD RKVLLLWKKA 240
  241 RGAPVLEKTF GYNIQYSAEN STNVTEINSI TTQHYELLLL GQTHCVSVTS FNSLGKSQEA 300
  301 ILRIPDAHEE TFQCIKGMQA YIAEPLLVVN WQSSIPEVDT WIVEWIPETA ESKFPALCWE 360
  361 SVSRVTNWTI EQDKLEPFTC YNISVYPVLG HHVGEPYSIQ AYAKEKAPTS GPNTTVNNIG 420
  421 LKTAVVTWKE IPKSIRNGFI HNYTIFYQAE GGKKLSKTVN SHTLQYDLES LTRRTSYTVS 480
  481 VMASTRAGGT IGSSINFKTS SISVFEIVLL TTLIGGGLLL LSIKTVTFGL RKPNRLTHLC 540
  541 CPDVPNPAES SLATWFGDDF KKSNMKETEN SGNTEDQVLK PCPVPADLTD KLVVNFENFL 600
  601 EVVLTAEAGK GQESVLGGEA NEYVTSPSRA DCPPGKSFKE PSVLTEAASE DCHSRTPGMA 660
  661 EETYSELDNQ PLPSCQSPGL EPPCEERAQN PYLKNSVTTR EFLMHENIPE YSKGEI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle