YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109466012, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQPSELCFP ICGAVFCCHG WAHILICYGG VDRNAEGTGG PSCCSKVKKT IQKMSENQQH  60
   61 IDPDVIAAKD TEEELIKQCE EMWKDVEECQ NKLSLIGPET LTNSNAQLSL LIMQVKCLTA 120
  121 ELGQWNKRKP ETVPLTEGVL LTLGKEEFQK LRYDLEMVRS IVQSENEKLK EDLAREQQWL 180
  181 DEQQQILETL NVLHSDLKNR VVTFTESRIF NELKAKILSI KEFKEKLLLA LGDFLEDHFP 240
  241 LPDGNTQKKR KNIQELNTQL ITLNEMLEML INRMFDVPHD PYVKINESFW PPYIELLLRY 300
  301 GIALRHPEDP SRIRLEAFHQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.89
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	320	0.99