YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109465338
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPALLPLS GRRIPPLNLG PPSFPHHRAT LRLSEKFILL LILSAFITLC FGAFFFLPDS  60
   61 SKHKRFDLGL EDVLIPHVDA GKGAKDPGVF LIHGPDEHRH RFEERRWAKK TKGSTGKTAA 120
  121 EAFADLRSVL ERARAKLKTS EMAVLQFQKK EKRVTEPLLP QRVKETVGKD REVRKKRGLI 180
  181 REMMKHAWDN YRTYGWGHNE LRPIARKGHS TNIFGSSQMG ATIVDALDTL YIMGLHDEFM 240
  241 DGQRWIEDNL DFSVNSEVSV FEVNIRFIGG LLAAYYLSGE EIFKTKAVQL AEKLLPAFNT 300
  301 PTGIPWAMVN LKSGVGRNWG WASAGSSILA EFGTLHMEFV HLSYLTGDLT YYNKVMHIRK 360
  361 LLQKMERPNG LYPNYLNPRT GRWGQYHTSV GGLGDSFYEY LLKAWLMSDK TDHEARRMYD 420
  421 DAVEAIEKHL IKKSRGGLVF IGEWKNGHLE RKMGHLACFA GGMFALGADG SRKDKAGHYL 480
  481 ELGAEIARTC HESYDRTALK LGPESFKFDG AVEAVAVRQA EKYYILRPEV IETYWYLWRF 540
  541 THDPRYRQWG WEAALAIEKS CRVSGGFSGV KDVYSPTPAH DDVQQSFFLA ETLKYLYLLF 600
  601 SGDDLLPLDH WVFNTEAHPL PVLRLANTTL SGNPAVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle