YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109465005
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPRGLHLAL HLALHLLLHL VLHLALHLAL HLALHLPFFR SRPTRVVAHC QNYASQRASR  60
   61 RREGGSPDPV FGNAMAAPVL RSGFPGRRWA LAWIDDCSRL RSGSQIGPIS NWARRQSSVA 120
  121 QPSLHTAQKP RKGEHKWAAV VGLEIHAQIS SNSKLFSGAQ VCFAAPPNSL VSYFDASLPG 180
  181 TLPVRYFISS VFIRKCLCHS GYR

Type	Start	End	Confidence
Cytoplasmic	1	11	0.43
Transmembrane Helix	12	33	0.52
Non-Cytoplasmic	34	203	0.87