YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109463922, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQVLLCGLK AYLVYSSSVA AGAQSGIEEC KYQFAWDRWN CPERALQLSS HGGLRSANRE  60
   61 TAFVHAISSA GVMYTLTRNC SLGDFDNCGC DDSRNGQLGG QGWLWGGCSD NVGFGEAISK 120
  121 QFVDALETGQ DARAAMNLHN NEAGRKAVKG TMKRTCKCHG VSGSCTTQTC WLQLPEFREV 180
  181 GAHLKEKYHA ALKVDLLQGA GNSAAGRGAI ADTFRSISTR ELVHLEDSPD YCLENKTLGL 240
  241 LGTEGRECLR RGRALGRWER RSCRRLCGDC GLAVEERRAE TVSSCNCKFH WCCAVRCEQC 300
  301 RRRVTKYFCS RAERPPRGAA HKPGKNP

Type	Start	End	Confidence
Signal Peptide	1	22	0.89
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	327	0.99