YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109462868, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQVTGGLGW RLSLLLLPLL MVQTGSWGFP ADPLSLQELR REFTVSLYLA RKLLSEVQGY  60
   61 VHSFAESRLP GVNLDLLPVG HHLPNVSLTF QAWRHLSDSD RLCFLATTLR PFPALLGGLE 120
  121 TQRTWTSSER EQLWAMRLDL RDLHRHLRFQ VLAVGFSCSE EEKEEEEEDE EEEEGKELLL 180
  181 GALGGPNQVS SQVSWPQLLY AYQLLHSLEL VLSRAVRDLL LLSLPRRPDS ACDP

Type	Start	End	Confidence
Signal Peptide	1	28	0.94
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	234	0.99