YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109459299, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLRILYSAE QTGPSAPLRY SRRQLPVGLA SQKPECGLSN EERVSRGLSG KAASLYKRPA  60
   61 GRSPPRSGYR AGVGFGVFAL VDNRASGTMA EGDNRSSNLL AVETASLEEQ LQGWGEVMLM 120
  121 ADKVLRWERA WFPPAIMGVV SLLFLIIYYL DPSVLSGVSC FVMFLCLADY LVPILAPRIF 180
  181 GSNKWTTEQQ QRFHEICSNL VKTRRRAVGW WKRLFTLKEE KPKMYFMTMI ISLAAVAWVG 240
  241 QQVHNLLLTY LIVTFVLLLP GLNQHGIILK YIGMAKREIN KLLKQKEKKN E

Type	Start	End	Confidence
Cytoplasmic	1	129	0.99
Transmembrane Helix	130	149	0.96
Non-Cytoplasmic	150	154	0.79
Transmembrane Helix	155	176	0.89
Cytoplasmic	177	221	0.96
Transmembrane Helix	222	241	0.91
Non-Cytoplasmic	242	246	0.81
Transmembrane Helix	247	269	0.89
Cytoplasmic	270	291	0.93