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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109462110
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 XGRRAWLSML LGLVLGFVLA SRLVLPRASE LKRVGPRRRP NPEGCRPGQA ASQPGGAPGD  60
   61 ARGAQLWPQG SAAEGVPRDR NFLFVGVMTA QKYLQTRAVA AYRTWSKTIP GKVEFFSSEG 120
  121 SDTSIPIPVV PLRGVDDSYP PQKKSFMMLK YMHDHYLDKY EWFMRADDDV YIKGDRLESF 180
  181 LRSLNSSEPL FLGQTGLGTT EEMGKLALEP GENFCMGGPG VILSREVLRR MAPHIGKCLR 240
  241 EMYTTHEDVE VGRCVRRFAG VQCVWSYEMQ QLFYENYEQN KKGYIRDLHS SKIHRAITLH 300
  301 PNKNPPYQYR LHSYMLSRKI AELRHRTIQL HREIVLMSKY SSTEIQKEDL QLGIPPSFMR 360
  361 FQARQREEIL EWEFLTGKYL YSATEGQPPR RGMDSAQREA LDDIVLQVME MINANAKTRG 420
  421 RIIDFKEIQY GYRRVNPMYG AEYILDLLLL YKKHKGKKMT VPVRRHAYLQ QTFSKIQFVE 480
  481 HEGLDAQELA DRINQDSGSL SFLSNSLKKL VPFQLPGSKM EHKEPKEKKI NILIPLSGRF 540
  541 DMFVRFMGNF EKTCLIPNLN VKLVILLFNS DSNPDKAKQV ELMRDYRVKY PKADMQVLPV 600
  601 SGGFSRALAL EVGSSQFSNE SLLFFCDVDL VFTAEFLQRC RANTVLGQQI YFPIIFSQYD 660
  661 PKIVYSGKVP SDNHFAFTQK TGFWRNYGFG ITCIYKGDLV RVGGFDVSIQ GWGLEDVDLF 720
  721 NKVVQAGLKT FRSQEVGVVH VHHPVFCDPN LDPKQYKMCL GSKASTFGST QQLAEMWLEK 780
  781 NDPSYSRGGN GSARTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle