YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157820247, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.27
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAAEPLRS VRHLSRVLLF LSQCYILSGD GSLNLDHSQP LAQSIKDPGP TRIFIVVPRA  60
   61 AENQLFSHLT ESTEIPPYMM KCPSNGLCSR LPADCIECAT NASCTYGKPV TFDCTVKPSV 120
  121 TCVDQDLRPQ RNFVINMTCR FCWQLPETDY ECSNSTTCMT VACPRQRYFA NCTVRDHIHC 180
  181 LGNRTFPKLL YCNWTGGYKW STALALSITL GGFGADRFYL GQWREGLGKL FSFGGLGIWT 240
  241 LIDVLLIGVG YVGPADGSLY I

Type	Start	End	Confidence
Cytoplasmic	1	195	0.53
Transmembrane Helix	196	220	0.60
Non-Cytoplasmic	221	229	0.31
Transmembrane Helix	230	255	0.81
Cytoplasmic	256	261	0.27