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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|213513304, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERESAAAEE PASPGRRRPR RRRWEGRTRT VRSNLLPSLG TEDSTAGASK GERLLMRGCI  60
   61 QHLADNRLKT TKYTLLSFLP KNLFEQFHRL ANVYFVFIAL LNFVPAVNAF QPVLALAPVL 120
  121 FILAVTAIKD LWEDYSRHRS DHEINHLGCL VFSREEKKYV NRYWKEIRVG DFVRLCCNEI 180
  181 IPADILLLSS SDPDGLCHIE TANLDGETNL KRRQVVRGFS ELVSEFNPLT FTSVIECEKP 240
  241 NNDLSRFRGC IIHSNGEKAG LHKENLLLRG CTIRNTEAVA GIVIYAGHET KALLNNSGPR 300
  301 YKRSQLERQM NCDVLWCVLL LVCISLFSAV GHGLWVRRYQ EKKALFDVPE SDGSSLSPAT 360
  361 AAVYSFLTMI IVLQVLIPIS LYVSIEIVKV CQVYFINQDI ELYDEETDSQ LQCRALNITE 420
  421 DLGQIKYIFS DKTGTLTENK MVFRRCTVSG IEYSHDANAQ RLAKYQEADS EEEEMVSKVG 480
  481 PISHRGSTGS HQSIWMTHKT QSIKSHRRTG SRAEAKRASM LSKHTAFSSP MEKDITPDPK 540
  541 LLEKVSECDR FLSIARHQEH PLAHLSPELS DVFDFFIALT ICNTVVVTSP DQPRQKVRVR 600
  601 FELKSPVKTI EDFLRKFTPS RLASGCSSIG NLTNNKSSNK SGSTFLPSLS QDNMLLRLEE 660
  661 RLGQTAPVIA SNGYASQASQ AESWTSECTS EQKCPGDQRE QQEGELRYEA ESPDEAALVY 720
  721 AAKAYNCALV DRLHDQVSVE LPHLGRLTFE LLHTLGFDSI RKRMSVVIRH PLTDEINVYT 780
  781 KGADSVVMDL LLPCSSDDAR GRHQKKIRSK TQNYLNLYAV EGLRTLCIAK RVLSKEEYAC 840
  841 WLQSHIEAET SVESREELLF QSAVRLETNL HLLGATGIED RLQDGVPETI AKLRQAGLQI 900
  901 WVLTGDKQET AINIAYACKL LDHGEEVITL NADSREACAA LLDQCLCYVQ SRNSRSVPQN 960
  961 SESSFSVGFS FNPASTSTDS SPSPSLVIDG RSLAYALEKS LEDKFLFLAK QCRSVLCCRS1020
 1021 TPLQKSMVVK LVRNKLKAMT LAIGDGANDV SMIQVADVGV GISGQEGMQA VMASDFAVPR1080
 1081 FRYLERLLIV HGHWCYSRLA NMVLYFFYKN TMFVGLLFWF QFYCGFSASA MIDQWYLIFF1140
 1141 NLLFSSLPQL VTGVLDKDVP ADMLLRKPQL YKSGQNMEEY SPRAFWLNMV DAAFQSLVCF1200
 1201 FIPYLAYYDS DVDVFTWGTP VTAIALFTFL LHLGIETKTW TWLNWLACGF STFLFFSVAL1260
 1261 IYNTSCATCY PPSNPYWTMP TLLGDPLFYL TCLIAPVAAL LPRLFFKALQ GSLFPTQLQL1320
 1321 GRQLAKKSLN KFSVPKETFA QGQPPGHTEP ELSERKAMGP FESLPRDCAS QASQFTQQLA1380
 1381 CSPEASGEPS AVDTNMPLRE NTLLEGLGSQ ASGSAMPREA ISEDCPGDSK RKSTSASQTA1440
 1441 PLSSLFHLPS FGSLNWISSL SLASGLGSVL QLSRSSLQMD KQDGEFLSNP PQPDQDLHNL1500
 1501 QGQVTGYF

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