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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109461503
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEADNNFKP QEKYGDVLTV HPGPRPVVRL CGTDTIREFL FDQAGTFSGQ GTVAVLNPVV  60
   61 HGYGVPLIPT SFFQRIAANI ICSIVFGECF DYKDHQFLHL LDLIYQTFAL MAPCPARSLF 120
  121 SGFLKYFPGV HKQISKNLQE ILNYIGHSVE KHMATLDPSA PRDFINTYLL HMENEKSNHH 180
  181 TEFHHQTSVL SHFFDGTETT STTLCCSFLI MLNFVVSLLL LLLLLLLLLF QPKTHGHLPP 240
  241 GPRPLPFLGN LLQMNRRGFL NSFMQLQEKY GDVFTVHLGP RPVVILCGTD TIREALVDQA 300
  301 EAFSGRGTVA VLHPVVQGYG VIFATGERWK TLRRFSLVTM KEFGMGKRSV DERIKEEAQC 360
  361 LVEELKKYKG APLNPTFLFQ SIAANTICSI VFGERFDYKD HQFLHLLDLV YKTSVLMGSL 420
  421 SSQQFRVILG YILSFADTHS HIHINIHKIN PFLKRPGNDQ RDRKVPSSPD SEKSNHHTEF 480
  481 NHQNLVISVL SLFFAGTETT STTLRCTFLI MLKYPHVAEK VQKEIDQVIG SHRLPTPDDR 540
  541 TKMPYTDAVI HEIQRFADLT PIGLPHRVTK DTVFRGYLLP KNTEVYPILS SALHDPRYFE 600
  601 QPDTFNPEHF LDANGALKKS EAFLPFSTGK RICLGEGIAR NELFIFFTAI LQNFTLASPV 660
  661 APEDIDLTPI NSGVGKIPSP YQINFLSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle