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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109460212
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHMDSVPPSP FPYPTPGTCG LLRLSPPPVS PRVTLAFPKV GKILRLPAQS DTVWNTLPHQ  60
   61 LTPSSSCQPL RLLGYPPCAA VGLPLCCSEV GPGGLTQFPT QSTATSSAVG HGFQPPNPVA 120
  121 WSADHTRPVH TTLSSFLFSG TTQSPDLRPS VSGSGICLGS WPPSPPPNPS PALSFTPLLS 180
  181 THSQWRDPAE TARLARSGLF RPVIDVPEST ASEQPEKGRR SRRGEEYSSP SLLPLPPTLA 240
  241 LLRTSPSSLT AAWSGDCLRA PTRCPGSPAQ RAPAPGPPRG AGASMEHLGP HHLHPGHAEP 300
  301 ISFGIDQILN SPDQGGCMGP ASRLQDGEYG LGCLVGGAYT YGGGGSAAGA GAGGTGAYGT 360
  361 GGPGGPGGPA GGGGGACSMG PLAGSYNVNM ALAGGPGPGG GGGGAGAGGA GALSAAGVIR 420
  421 VPAHRPLAGA VAHPQPLATG LPTVPSVPAV PGVNNLTGLT FPWMESNRRY TKDRFTGHPY 480
  481 QNRTPPKKKK PRTSFTRLQI CELEKRFHRQ KYLASAERAA LAKALKMTDA QVKTWFQNRR 540
  541 TKWRRQTAEE REAERQQANR ILLQLQQEAF QKSLAQPLPA DPLCVHNSSL FALQNLQPWS 600
  601 DDSTKITSVT SVASACE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle